STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (318 aa)    
Predicted Functional Partners:
Tbis_1906
PFAM: NLPA lipoprotein; KEGG: pmy:Pmen_4505 NlpA lipoprotein; Belongs to the nlpA lipoprotein family.
 0.999
Tbis_1907
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl01_2337 binding-protein dependent transport system inner membrane protein.
 0.999
Tbis_3269
PFAM: protein of unknown function DUF214; KEGG: glo:Glov_3570 protein of unknown function DUF214.
 
      0.899
Tbis_0308
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gbm:Gbem_2642 binding-protein-dependent transport systems inner membrane component.
 
    0.858
Tbis_2946
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_2716 binding-protein-dependent transport systems inner membrane component.
 
    0.846
Tbis_0523
PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; KEGG: sus:Acid_2178 DtxR family iron dependent repressor.
   
   0.824
Tbis_0738
KEGG: xau:Xaut_2458 ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydD; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; SMART: AAA ATPase.
    
0.817
Tbis_1601
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dppC; ABC transporter membrane spanning protein (dipeptide); K02034 peptide/nickel transport system permease protein.
 
    0.801
Tbis_2689
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      0.696
Tbis_1851
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gme:Gmet_1236 binding-protein dependent transport system inner membrane protein.
 
    0.695
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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