STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1928KEGG: ccs:CCNA_02361 polysaccharide biosynthesis protein CelD. (364 aa)    
Predicted Functional Partners:
Tbis_1926
Membrane protein involved in the export of O- antigen and teichoic acid-like protein; KEGG: rle:pRL110396 putative transmembrane protein.
 
    0.801
Tbis_0087
Hypothetical protein; KEGG: bxe:Bxe_A1993 P-loop ATPase protein.
  
     0.643
Tbis_2675
PFAM: glycosyl transferase family 2; KEGG: rle:pRL110395 putative succinoglycan biosynthesis protein.
 
     0.639
Tbis_0084
PFAM: cell divisionFtsK/SpoIIIE; KEGG: cvi:CV_2479 cell division FtsK transmembrane protein.
  
     0.609
Tbis_3542
PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcz:BCZK1558 transcriptional regulator.
  
     0.594
Tbis_1175
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sfu:Sfum_2920 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.590
Tbis_2870
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: hypothetical protein.
  
     0.571
Tbis_1909
PFAM: FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; KEGG: noc:Noc_2092 integrins alpha chain.
  
     0.566
Tbis_0064
TIGRFAM: PAS sensor protein; KEGG: bba:Bd1322 putative sensory protein.
  
     0.537
Tbis_3164
KEGG: sfu:Sfum_3153 hypothetical protein.
  
     0.516
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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