STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_1972TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: bha:BH3467 hypothetical protein. (470 aa)    
Predicted Functional Partners:
Tbis_1969
KEGG: bcr:BCAH187_A5123 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.999
Tbis_1968
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.998
Tbis_1967
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: bha:BH3468 nitrogen fixation protein.
 
  
 0.977
Tbis_1973
Putative transcriptional regulator; PFAM: regulatory protein ArsR; regulatory protein MarR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein MarR; KEGG: yen:YE4157 hypothetical protein.
  
  
 0.962
Tbis_1966
PFAM: protein of unknown function DUF59; KEGG: eli:ELI_12745 metal-sulfur cluster biosynthetic enzyme.
 
   
 0.957
Tbis_3439
Cysteine desulfurase; PFAM: aminotransferase class V; KEGG: scl:sce1210 hypothetical protein.
 
 0.941
Tbis_1971
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: mxa:MXAN_1155 FeS assembly protein SufD.
 
   
0.916
Tbis_1970
PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B1110 anthranilate dioxygenase ferredoxin reductase(AndAb).
 
     0.841
Tbis_1285
TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: aeh:Mlg_0435 iron-sulfur cluster insertion protein ErpA; Belongs to the HesB/IscA family.
  
 
 0.544
Tbis_1975
PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_1598 ABC transporter, permease protein, ABC-2 family.
       0.495
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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