Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tbis_2008KEGG: hypothetical protein. (317 aa)    
Predicted Functional Partners:
Tbis_2007
PFAM: virulence factor MVIN family protein; KEGG: ade:Adeh_2384 integral membrane protein MviN.
 
   
 0.933
Tbis_2010
PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: bha:BH2771 hypothetical protein.
 
     0.925
Tbis_2009
Hypothetical protein; KEGG: GK25336 gene product from transcript GK25336- RA.
 
     0.921
Tbis_2006
PFAM: glycosyl transferase group 1; KEGG: mno:Mnod_4364 glycosyl transferase group 1.
 
    0.904
Tbis_0034
PFAM: glycosyl transferase family 2; KEGG: bha:BH2769 dolichyl-phosphate mannose synthase.
    0.868
Tbis_0032
Hypothetical protein; KEGG: GH10507 gene product from transcript GH10507- RA.
 
     0.806
Tbis_1827
KEGG: bha:BH1523 hypothetical protein.
 
     0.799
Tbis_3363
PFAM: metallophosphoesterase; KEGG: dal:Dalk_2417 metallophosphoesterase.
  
     0.651
murF
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 
 0.608
Tbis_2011
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.547
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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