STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_2015Hypothetical protein. (115 aa)    
Predicted Functional Partners:
Tbis_1701
Hypothetical protein.
  
     0.769
Tbis_3537
Hypothetical protein.
  
     0.722
Tbis_0596
KEGG: Hypothetical protein CBG02561.
  
     0.706
Tbis_0222
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: bcr:BCAH187_A1158 anti-sigma B factor.
  
     0.705
Tbis_0455
Hypothetical protein; KEGG: methyl-accepting chemotaxis sensory transducer with cache sensor.
  
     0.667
Tbis_1190
Hypothetical protein.
  
     0.546
Tbis_2013
KEGG: acp:A2cp1_1226 hemolysin A; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein.
       0.537
Tbis_1447
TIGRFAM: trp region conserved hypothetical protein; KEGG: hypothetical protein.
  
     0.516
Tbis_3000
KEGG: ade:Adeh_2859 hypothetical protein.
  
     0.509
Tbis_3347
Hypothetical protein.
  
     0.501
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.