STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_2179Hypothetical protein. (148 aa)    
Predicted Functional Partners:
Tbis_2180
Hypothetical protein.
      
0.773
Tbis_2181
Hypothetical protein.
      
0.773
Tbis_2182
Hypothetical protein.
       0.482
Tbis_2183
Hypothetical protein; KEGG: smt:Smal_0854 outer membrane autotransporter barrel domain protein.
       0.476
Tbis_2184
Hypothetical protein; KEGG: gbm:Gbem_1923 regulator of chromosome condensation, RCC1.
       0.435
Tbis_2185
Hypothetical protein.
       0.435
Tbis_2186
Hypothetical protein.
       0.435
Tbis_2187
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: xac:XAC3860 N-acetylmuramoyl-L-alanine amidase.
       0.427
Tbis_2177
KEGG: rsq:Rsph17025_2089 hypothetical protein.
       0.414
Tbis_2178
Hypothetical protein.
       0.414
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.