STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_2252PFAM: OsmC family protein; KEGG: mlo:mlr4254 osmotically inducible protein C, putative ATP/GTP binding protein. (142 aa)    
Predicted Functional Partners:
Tbis_2253
KEGG: noc:Noc_1740 glycogen debranching protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.669
Tbis_2692
PFAM: Ferritin Dps family protein; KEGG: scl:sce7884 Dps family DNA-binding ferritin- like protein; Belongs to the Dps family.
  
  
 0.649
Tbis_0236
PFAM: Catalase domain protein; KEGG: abo:ABO_1845 catalase; Belongs to the catalase family.
  
  
 0.480
Tbis_3371
PFAM: cyclase/dehydrase; transport-associated; KEGG: mxa:MXAN_4249 hypothetical protein.
   
  
 0.465
Tbis_2424
PFAM: ThiJ/PfpI domain protein; KEGG: bam:Bamb_1995 ThiJ/PfpI domain-containing protein.
  
  
 0.451
Tbis_2251
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rfr:Rfer_0523 acyl-CoA dehydrogenase-like.
  
    0.431
Tbis_2767
Superoxide dismutase copper/zinc binding protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
  
 0.415
Tbis_1690
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; globin; KEGG: afr:AFE_0860 iron-sulfur cluster-binding protein/oxidoreductase, FAD/NAD-binding; Belongs to the globin family.
     
 0.409
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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