STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_2350KEGG: mpt:Mpe_A1700 hypothetical protein. (384 aa)    
Predicted Functional Partners:
Tbis_2351
Nitrite reductase (NO-forming); PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: bpd:BURPS668_A2061 multicopper oxidase domain- containing protein.
     0.995
Tbis_2349
Putative transcriptional regulator.
     0.979
Tbis_3240
Putative transcriptional regulator; KEGG: bcb:BCB4264_A4356 hypothetical protein.
 
     0.765
Tbis_2352
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ret:RHE_PE00218 Co/Zn/Cd cation efflux system protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.445
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.