STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_2642PFAM: glycosyl transferase family 9; KEGG: bpt:Bpet2385 glycosyltransferase. (343 aa)    
Predicted Functional Partners:
Tbis_2645
TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase family protein; HAD- superfamily hydrolase, subfamily IA, variant 3; HAD- superfamily hydrolase, subfamily IA, variant 1; KEGG: dvm:DvMF_3135 histidinol-phosphate phosphatase family protein.
   
 0.991
Tbis_2639
rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
  
 0.985
Tbis_2640
KEGG: oca:OCAR_5332 phosphoheptose isomerase.
 
   
 0.952
Tbis_2641
PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_5640 glycosyl transferase, group 1.
 
  
 0.948
Tbis_2643
PFAM: glycosyl transferase family 2; KEGG: bpd:BURPS668_A3168 glycosyl transferase, group 2 family protein.
 
   
 0.939
Tbis_2638
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bcm:Bcenmc03_6034 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.927
Tbis_2644
PFAM: Carbamoyltransferase; KEGG: cti:RALTA_A0588 carbamoyltransferase.
 
  
 0.922
Tbis_2646
PFAM: glycosyl transferase group 1; KEGG: reu:Reut_B4382 glycosyl transferase, group 1.
 
  
 0.902
Tbis_2327
KEGG: mpt:Mpe_B0553 protein tyrosine/serine phosphatase.
  
   0.835
Tbis_2637
PFAM: glycosyl transferase family 9; KEGG: bpt:Bpet2388 glycosyltransferase.
 
    
0.803
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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