STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_2852Hypothetical protein. (408 aa)    
Predicted Functional Partners:
Tbis_2851
PFAM: peptidase M55 D-aminopeptidase; KEGG: azc:AZC_2991 D-aminopeptidase.
       0.773
Tbis_2853
Hypothetical protein; KEGG: KRT6A; keratin 6A; K07605 type II keratin, basic.
       0.773
Tbis_2854
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bcs:BCAN_A2226 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.625
Tbis_2850
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bbr:BB1555 hypothetical protein.
       0.531
Tbis_2855
PFAM: glycosyl transferase group 1; KEGG: acr:Acry_1363 glycosyl transferase, group 1.
       0.504
Tbis_2856
PFAM: Amylo-alpha-16-glucosidase; KEGG: scl:sce1523 glycogen debranching protein.
       0.504
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.