STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_2945PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsh:Dshi_0658 ABC transporter related. (262 aa)    
Predicted Functional Partners:
Tbis_2946
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_2716 binding-protein-dependent transport systems inner membrane component.
  
 0.996
Tbis_1601
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dppC; ABC transporter membrane spanning protein (dipeptide); K02034 peptide/nickel transport system permease protein.
  
 0.984
Tbis_1851
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gme:Gmet_1236 binding-protein dependent transport system inner membrane protein.
  
 0.984
Tbis_0308
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gbm:Gbem_2642 binding-protein-dependent transport systems inner membrane component.
  
 0.983
Tbis_1658
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6084 ABC transporter, permease.
  
 0.979
Tbis_3309
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3642 dipeptide ABC transporter (permease).
  
 0.977
Tbis_2947
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_4025 binding-protein-dependent transporter inner membrane protein.
 
 0.967
Tbis_2948
PFAM: extracellular solute-binding protein family 5; KEGG: cko:CKO_01524 hypothetical protein.
 
  
 0.937
Tbis_1321
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpo:Mpop_1210 ABC transporter related.
 
    
0.909
Tbis_3269
PFAM: protein of unknown function DUF214; KEGG: glo:Glov_3570 protein of unknown function DUF214.
 
      0.900
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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