STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_3030PFAM: Methyltransferase type 12; Methyltransferase type 11; methyltransferase small; KEGG: rce:RC1_0925 SAM-dependent methyltransferase, putative. (258 aa)    
Predicted Functional Partners:
Tbis_3032
KEGG: ecf:ECH74115_5811 ATP-dependent DNA helicase, UvrD/REP family.
 
     0.600
Tbis_3031
KEGG: Hypothetical protein CBG02561.
       0.523
Tbis_3029
PFAM: extracellular solute-binding protein family 1; KEGG: acr:Acry_0984 extracellular solute-binding protein.
       0.510
Tbis_0586
KEGG: bte:BTH_I2309 hypothetical protein.
  
     0.431
Tbis_3033
Hypothetical protein; KEGG: dps:DP2503 RNA polymerase sigma factor (RpoD).
       0.427
Tbis_3034
Cysteinyl-tRNA synthetase-like protein; KEGG: ppr:PBPRB1226 cysteinyl-tRNA synthetase CysS.
       0.425
Tbis_2546
PFAM: GCN5-related N-acetyltransferase; KEGG: bja:bll8307 hypothetical protein.
  
     0.410
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.