STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_3203PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: vei:Veis_0234 acyl-CoA dehydrogenase domain protein. (381 aa)    
Predicted Functional Partners:
Tbis_2268
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sfu:Sfum_1404 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
 0.838
Tbis_2845
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: met:M446_2006 electron transfer flavoprotein alpha subunit.
 
 0.760
Tbis_2846
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: sat:SYN_02636 electron transfer flavoprotein beta-subunit.
 
 0.743
Tbis_2090
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nar:Saro_1417 enoyl-CoA hydratase.
   
 0.710
Tbis_1305
PFAM: AMP-dependent synthetase and ligase; KEGG: mxa:MXAN_2959 putative long-chain-fatty-acid-- CoA ligase.
  
 0.598
Tbis_1953
PFAM: AMP-dependent synthetase and ligase; KEGG: psa:PST_0623 AMP-dependent synthetase and ligase.
  
 0.598
Tbis_1604
PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_7494 acyl-CoA synthetase.
 
 
 
 0.543
Tbis_1614
PFAM: AMP-dependent synthetase and ligase; KEGG: dal:Dalk_3492 AMP-dependent synthetase and ligase.
 
 
 
 0.543
Tbis_1905
PFAM: AMP-dependent synthetase and ligase; KEGG: pla:Plav_0848 AMP-dependent synthetase and ligase.
   
 
 0.543
Tbis_2432
PFAM: AMP-dependent synthetase and ligase; KEGG: spe:Spro_2474 AMP-dependent synthetase and ligase.
 
 
 
 0.543
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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