STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_3234TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: xau:Xaut_2187 hydrogenase expression/formation protein HypE. (372 aa)    
Predicted Functional Partners:
Tbis_3236
TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: bbt:BBta_0474 hydrogenase expression/formation.
 
 0.998
Tbis_3230
TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; KEGG: sus:Acid_4209 (NiFe) hydrogenase maturation protein HypF.
 
 
 0.996
Tbis_3231
TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: sus:Acid_6551 hydrogenase assembly chaperone HypC/HupF.
 
 
 0.995
Tbis_3235
TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: msl:Msil_3752 hydrogenase assembly chaperone HypC/HupF.
 
 
 0.992
Tbis_2618
TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: azc:AZC_0610 hydrogenase expression/formation protein.
 
 
 0.973
Tbis_3219
TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: rpc:RPC_4559 hydrogenase accessory protein HypB.
 
  
 0.903
hypA-2
Hydrogenase expression/synthesis HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.847
Tbis_3228
PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] domain protein; KEGG: sal:Sala_3205 nitrogen-fixing NifU-like.
       0.840
Tbis_3232
Hypothetical protein; KEGG: reh:PHG074 putative sedoheptulose 7-phosphate isomerase.
     
 0.829
Tbis_3233
KEGG: reh:PHG074 putative sedoheptulose 7-phosphate isomerase.
     
 0.816
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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