STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbis_3564KEGG: bcm:Bcenmc03_0495 hypothetical protein. (409 aa)    
Predicted Functional Partners:
Tbis_3401
KEGG: mxa:MXAN_5370 putative lipoprotein.
 
     0.770
Tbis_2114
Hypothetical protein.
  
     0.739
Tbis_2282
PFAM: protein of unknown function DUF1486; KEGG: hne:HNE_2994 hypothetical protein.
  
     0.731
Tbis_2409
KEGG: SL44-1; basic proline-rich protein.
  
     0.722
Tbis_2321
PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: cak:Caul_3206 TAP domain-containing protein.
  
     0.721
Tbis_0087
Hypothetical protein; KEGG: bxe:Bxe_A1993 P-loop ATPase protein.
  
     0.713
Tbis_3213
KEGG: pin:Ping_0970 hypothetical protein.
  
     0.709
Tbis_2466
TIGRFAM: rod shape-determining protein MreD; KEGG: sus:Acid_3813 hypothetical protein.
  
     0.706
Tbis_2124
PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: bbt:BBta_7293 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
     0.650
Tbis_0753
Hypothetical protein; KEGG: GK24882 gene product from transcript GK24882- RA.
  
     0.610
Your Current Organism:
Thermobispora bispora
NCBI taxonomy Id: 469371
Other names: T. bispora DSM 43833, Thermobispora bispora ATCC 19993, Thermobispora bispora DSM 43833, Thermobispora bispora str. DSM 43833, Thermobispora bispora strain DSM 43833
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