STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU94308.1Cytidyltransferase-related enzyme; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Cytidylyltransferase; TIGRFAM: glycerol-3-phosphate cytidylyltransferase; cytidyltransferase-related domain. (464 aa)    
Predicted Functional Partners:
ACU94307.1
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; PFAM: Aminotransferase class-V.
 
  
 0.861
ACU94310.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
  
 0.851
ACU94309.1
PFAM: Glycosyl transferase family 2.
  
  
 0.849
rbsK
Sugar kinase, ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
  
 0.667
ACU94311.1
LPS biosynthesis protein; PFAM: LICD Protein Family.
 
     0.651
ACU94304.1
LPS biosynthesis protein; PFAM: LICD Protein Family.
 
     0.643
ACU94536.1
Predicted PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.638
lysS
lysyl-tRNA synthetase (class II); PFAM: OB-fold nucleic acid binding domain; tRNA synthetases class II (D, K and N); TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.627
ACU95037.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
  
 0.612
ACU94733.1
Predicted PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.591
Your Current Organism:
Cryptobacterium curtum
NCBI taxonomy Id: 469378
Other names: C. curtum DSM 15641, Cryptobacterium curtum 12-3, Cryptobacterium curtum ATCC 700683, Cryptobacterium curtum DSM 15641, Cryptobacterium curtum str. DSM 15641, Cryptobacterium curtum strain DSM 15641
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