STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dpep_0130PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: afl:Aflv_2244 methyl-accepting chemotaxis protein. (694 aa)    
Predicted Functional Partners:
Dpep_0763
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2710 CheA signal transduction histidine kinase.
 
 0.996
Dpep_1587
PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: lip:LI0729 chemotaxis signal transduction protein.
 
 0.964
Dpep_0766
KEGG: gme:Gmet_2707 MCP methyltransferase, CheR- type; PFAM: MCP methyltransferase CheR-type; Tetratricopeptide TPR_2 repeat protein; SMART: MCP methyltransferase CheR-type.
 
 0.947
Dpep_0270
PFAM: CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP- binding region ATPase domain protein; KEGG: hmo:HM1_2247 CheA signal transduction histidine kinase.
 
 0.943
Dpep_0466
PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: sru:SRU_2606 purine-binding chemotaxis protein CheW.
  
 0.915
Dpep_1321
PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: rru:Rru_A2322 CheW protein.
  
 0.915
Dpep_0765
PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: gme:Gmet_2708 CheW protein.
  
 0.904
Dpep_1632
Putative PAS/PAC sensor protein; PFAM: response regulator receiver; SMART: response regulator receiver; PAS domain containing protein; KEGG: ppd:Ppro_3008 multi-sensor hybrid histidine kinase.
 
 0.895
Dpep_2383
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: azo:azo0689 GGEF/EAL/PAS/PAC-domain- containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
 
 0.881
Dpep_2118
MCP methyltransferase, CheR-type; KEGG: bha:BH1655 chemotaxis protein methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type.
 
 0.879
Your Current Organism:
Dethiosulfovibrio peptidovorans
NCBI taxonomy Id: 469381
Other names: D. peptidovorans DSM 11002, Dethiosulfovibrio peptidovorans DSM 11002, Dethiosulfovibrio peptidovorans str. DSM 11002, Dethiosulfovibrio peptidovorans strain DSM 11002
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