STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dpep_0288PFAM: flagellar hook capping protein; KEGG: lsp:Bsph_1557 hypothetical protein. (150 aa)    
Predicted Functional Partners:
Dpep_0281
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bha:BH2445 flagellar motor switch protein.
 
  
 0.998
Dpep_0301
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: pmo:Pmob_1685 flagellar basal-body rod protein FlgC.
 
 
 0.997
Dpep_0296
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.996
Dpep_0287
PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein; KEGG: trq:TRQ2_0255 hypothetical protein.
 
 
 0.995
fliE
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: gur:Gura_4214 flagellar hook-basal body complex subunit FliE.
 
 
 0.994
Dpep_0302
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.994
Dpep_0278
PFAM: export protein FliQ family 3; KEGG: bbr:BB2577 flagellar biosynthetic protein FliQ.
 
 
 0.992
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.990
Dpep_1970
PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: gbm:Gbem_3763 flagellar basal body rod protein.
 
 
 0.988
Dpep_1971
TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: cff:CFF8240_0523 flagellar basal body rod protein FlgG.
 
 
 0.988
Your Current Organism:
Dethiosulfovibrio peptidovorans
NCBI taxonomy Id: 469381
Other names: D. peptidovorans DSM 11002, Dethiosulfovibrio peptidovorans DSM 11002, Dethiosulfovibrio peptidovorans str. DSM 11002, Dethiosulfovibrio peptidovorans strain DSM 11002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.