STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dpep_1628PFAM: aminotransferase class-III; KEGG: bcz:BCZK3884 acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (374 aa)    
Predicted Functional Partners:
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
 
 0.994
Dpep_1627
PFAM: aspartate/glutamate/uridylate kinase; KEGG: mxa:MXAN_5105 acetylglutamate kinase.
 
 
 0.985
Dpep_1629
TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase; PFAM: peptidase M20; KEGG: aeh:Mlg_1868 succinyl-diaminopimelate desuccinylase.
 
 0.972
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: mta:Moth_2284 argininosuccinate lyase.
 
  
 0.890
argG
KEGG: bha:BH3187 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; ExsB family protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 
 0.884
Dpep_2166
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 0.845
Dpep_1625
TIGRFAM: lysine biosynthesis enzyme LysX; alpha-L- glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; KEGG: mpt:Mpe_A2610 SSU ribosomal protein S6P modification protein; Belongs to the RimK family.
 
   
 0.819
Dpep_1624
TIGRFAM: lysine biosynthesis protein LysW.
 
   
 0.818
Dpep_0976
PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: bha:BH2894 ornithine carbamoyltransferase.
 
 0.816
Dpep_1089
PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sil:SPO0678 agmatinase, putative; Belongs to the arginase family.
  
 0.668
Your Current Organism:
Dethiosulfovibrio peptidovorans
NCBI taxonomy Id: 469381
Other names: D. peptidovorans DSM 11002, Dethiosulfovibrio peptidovorans DSM 11002, Dethiosulfovibrio peptidovorans str. DSM 11002, Dethiosulfovibrio peptidovorans strain DSM 11002
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