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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dpep_1663PFAM: Ppx/GppA phosphatase; KEGG: gbm:Gbem_2233 Ppx/GppA phosphatase. (306 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.897
Dpep_1906
(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
 
 
 0.873
Dpep_0403
PFAM: Ppx/GppA phosphatase; KEGG: mbn:Mboo_1456 Ppx/GppA phosphatase.
  
  
 
0.799
Dpep_1662
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: helicase domain protein; DEAD-like helicase; KEGG: ade:Adeh_3405 DEAD/DEAH box helicase-like.
       0.779
Dpep_0406
PFAM: protein of unknown function DUF344; KEGG: mac:MA2391 hypothetical protein.
 
  
 0.595
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
 
 
 
  0.591
Dpep_1667
PFAM: Na+/Picotransporter; KEGG: bcz:BCZK0683 sodium-dependent phosphate transporter.
       0.585
Dpep_1668
TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: gme:Gmet_2705 phosphate uptake regulator, PhoU.
     
 0.574
Dpep_1664
PFAM: conserved hypothetical protein; KEGG: dps:DP0537 hypothetical protein.
       0.568
Dpep_0261
PFAM: protein of unknown function DUF501; KEGG: pmo:Pmob_1853 hypothetical protein.
  
 
  0.563
Your Current Organism:
Dethiosulfovibrio peptidovorans
NCBI taxonomy Id: 469381
Other names: D. peptidovorans DSM 11002, Dethiosulfovibrio peptidovorans DSM 11002, Dethiosulfovibrio peptidovorans str. DSM 11002, Dethiosulfovibrio peptidovorans strain DSM 11002
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