STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dpep_2019PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: pca:Pcar_0833 NADH:ubiquinone oxidoreductase 24 kD subunit. (156 aa)    
Predicted Functional Partners:
Dpep_0068
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_0620 NADH dehydrogenase (quinone).
 0.999
Dpep_2021
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_2704 NADH dehydrogenase (quinone).
 0.999
Dpep_2022
PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; KEGG: sfu:Sfum_3509 formate dehydrogenase, alpha subunit.
 0.998
Dpep_0069
PFAM: molybdopterin oxidoreductase; ferredoxin; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; KEGG: aoe:Clos_0277 molybdopterin oxidoreductase.
  
 0.981
Dpep_2023
Hydrogen dehydrogenase; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: pin:Ping_1216 hydrogen dehydrogenase.
   
 0.973
Dpep_2020
KEGG: pca:Pcar_0834 NADH dehydrogenase I, F subunit.
 
 
 0.969
Dpep_2425
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: reu:Reut_A1047 ferredoxin.
 
 0.969
Dpep_2024
PFAM: nickel-dependent hydrogenase large subunit; KEGG: sus:Acid_5015 nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
   
 
 0.961
Dpep_2326
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_4144 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 0.946
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 0.922
Your Current Organism:
Dethiosulfovibrio peptidovorans
NCBI taxonomy Id: 469381
Other names: D. peptidovorans DSM 11002, Dethiosulfovibrio peptidovorans DSM 11002, Dethiosulfovibrio peptidovorans str. DSM 11002, Dethiosulfovibrio peptidovorans strain DSM 11002
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