STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ65705.1PFAM: Domain of unknown function (DUF307). (136 aa)    
Predicted Functional Partners:
ADQ68171.1
Predicted HAD superfamily hydrolase; PFAM: haloacid dehalogenase-like hydrolase.
  
     0.621
ADQ65706.1
dephospho-CoA kinase; Belongs to the UPF0200 family.
       0.555
ADQ65707.1
Uncharacterized conserved protein; PFAM: Protein of unknown function DUF54; Belongs to the UPF0201 family.
       0.555
ADQ67619.1
PFAM: HTH DNA binding domain.
  
     0.484
ADQ68471.1
Site-specific recombinase XerD; PFAM: Phage integrase family.
  
     0.462
ADQ67544.1
Predicted membrane protein; PFAM: EamA-like transporter family.
  
     0.450
ADQ65783.1
TIGRFAM: lysine biosynthesis protein LysW.
  
     0.438
ADQ66879.1
Site-specific recombinase XerD; PFAM: Phage integrase family.
  
     0.425
ADQ67491.1
Predicted ATPase; PFAM: Domain of unknown function DUF87.
  
     0.425
ADQ65810.1
Predicted permease; PFAM: Domain of unknown function DUF20.
  
     0.424
Your Current Organism:
Halogeometricum borinquense
NCBI taxonomy Id: 469382
Other names: H. borinquense DSM 11551, Halogeometricum borinquense ATCC 700274, Halogeometricum borinquense DSM 11551, Halogeometricum borinquense JCM 10706, Halogeometricum borinquense PR 3, Halogeometricum borinquense str. DSM 11551, Halogeometricum borinquense strain DSM 11551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.