STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ65819.1PFAM: Zn-ribbon containing protein (DUF2072). (370 aa)    
Predicted Functional Partners:
ADQ65820.1
PFAM: Uncharacterized protein conserved in archaea (DUF2073).
 
   
 0.885
ADQ65821.1
PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain.
 
   
 0.857
ADQ67181.1
Predicted acyltransferase; PFAM: Protein of unknown function, DUF583.
  
     0.733
ADQ66952.1
PFAM: Membrane protein of unknown function DUF63.
  
     0.670
ADQ68344.1
Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF552).
  
     0.668
ADQ67869.1
Predicted membrane protein; PFAM: Transmembrane exosortase (Exosortase_EpsH).
  
     0.650
ADQ67677.1
Uncharacterized conserved protein.
  
     0.618
ADQ68482.1
Predicted transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
  
     0.618
ADQ65861.1
Leader peptidase family protein; PFAM: Archaeal Peptidase A24 C-terminus Type II; Type IV leader peptidase family.
  
     0.601
ADQ66567.1
Signal peptidase I.
  
     0.601
Your Current Organism:
Halogeometricum borinquense
NCBI taxonomy Id: 469382
Other names: H. borinquense DSM 11551, Halogeometricum borinquense ATCC 700274, Halogeometricum borinquense DSM 11551, Halogeometricum borinquense JCM 10706, Halogeometricum borinquense PR 3, Halogeometricum borinquense str. DSM 11551, Halogeometricum borinquense strain DSM 11551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.