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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ65820.1PFAM: Uncharacterized protein conserved in archaea (DUF2073). (129 aa)    
Predicted Functional Partners:
ADQ65821.1
PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain.
 
   
 0.960
ADQ65819.1
PFAM: Zn-ribbon containing protein (DUF2072).
 
   
 0.885
cofC
Phospholactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.727
ADQ67217.1
Predicted transcriptional regulator, contains C-terminal CBS domains; PFAM: Domain of unknown function.
  
     0.726
ADQ67677.1
Uncharacterized conserved protein.
  
     0.715
ADQ68356.1
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase; PFAM: ACT domain.
  
     0.700
ADQ68501.1
Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF460).
  
     0.685
ADQ67961.1
Predicted transcriptional regulator; PFAM: MarR family.
  
     0.679
ADQ66446.1
PFAM: Uncharacterized protein conserved in archaea (DUF2150).
  
     0.666
ADQ68422.1
OB-fold nucleic acid binding protein.
  
     0.665
Your Current Organism:
Halogeometricum borinquense
NCBI taxonomy Id: 469382
Other names: H. borinquense DSM 11551, Halogeometricum borinquense ATCC 700274, Halogeometricum borinquense DSM 11551, Halogeometricum borinquense JCM 10706, Halogeometricum borinquense PR 3, Halogeometricum borinquense str. DSM 11551, Halogeometricum borinquense strain DSM 11551
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