Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADQ65851.1ABC-type transport system involved in multi-copper enzyme maturation, permease component; PFAM: ABC-2 type transporter. (306 aa)    
Predicted Functional Partners:
ADQ65850.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.953
ADQ67889.1
Nitrous oxidase accessory protein; PFAM: NosL.
 
  
 0.830
ADQ67888.1
Predicted lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
  
 0.760
ADQ67890.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.616
ADQ65759.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.597
ADQ65967.1
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit.
  
 
 0.543
ADQ66182.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.543
ADQ66212.1
Hypothetical protein.
  
 
 0.543
ADQ67366.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.543
ADQ67748.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.543
Your Current Organism:
Halogeometricum borinquense
NCBI taxonomy Id: 469382
Other names: H. borinquense DSM 11551, Halogeometricum borinquense ATCC 700274, Halogeometricum borinquense DSM 11551, Halogeometricum borinquense JCM 10706, Halogeometricum borinquense PR 3, Halogeometricum borinquense str. DSM 11551, Halogeometricum borinquense strain DSM 11551
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