STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ66006.1Hypothetical protein. (453 aa)    
Predicted Functional Partners:
ADQ66005.1
Hypothetical protein.
 
    
0.656
ADQ66008.1
Nicotinic acid phosphoribosyltransferase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain.
       0.607
ADQ66007.1
Hypothetical protein.
       0.603
ADQ67320.1
Predicted membrane-bound mannosyltransferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; TIGRFAM: conserved hypothetical protein TIGR03663.
  
     0.451
ADQ68067.1
Chlor_Arch_YYY domain; PFAM: Uncharacterized membrane protein (DUF2298); TIGRFAM: Chlor_Arch_YYY domain.
  
     0.431
ADQ68066.1
PFAM: Glycosyl transferase family 2.
  
     0.418
ADQ67714.1
Predicted membrane-bound mannosyltransferase; TIGRFAM: conserved hypothetical protein TIGR03663.
  
     0.411
Your Current Organism:
Halogeometricum borinquense
NCBI taxonomy Id: 469382
Other names: H. borinquense DSM 11551, Halogeometricum borinquense ATCC 700274, Halogeometricum borinquense DSM 11551, Halogeometricum borinquense JCM 10706, Halogeometricum borinquense PR 3, Halogeometricum borinquense str. DSM 11551, Halogeometricum borinquense strain DSM 11551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.