STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ67011.1Acyl dehydratase; PFAM: MaoC like domain. (153 aa)    
Predicted Functional Partners:
ADQ66790.1
Flavin-dependent dehydrogenase; PFAM: FAD binding domain.
 
 
 0.607
ADQ67010.1
Zn-dependent protease with chaperone function; PFAM: Peptidase family M48.
       0.546
ADQ67770.1
acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain.
 
 
 0.482
ADQ66180.1
PEP phosphonomutase-like enzyme; PFAM: Isocitrate lyase family; TIGRFAM: isocitrate lyase.
 
  
 0.446
ADQ67009.1
PAS domain S-box; PFAM: Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
       0.422
ADQ67008.1
MaoC-like protein; PFAM: MaoC like domain.
       0.420
ADQ66115.1
PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases.
  
 
 0.415
ADQ66643.1
3-oxoacyl-(acyl-carrier-protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II.
  
 
 0.415
ADQ67942.1
acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain.
  
 
 0.415
ADQ66355.1
Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin.
    
  0.400
Your Current Organism:
Halogeometricum borinquense
NCBI taxonomy Id: 469382
Other names: H. borinquense DSM 11551, Halogeometricum borinquense ATCC 700274, Halogeometricum borinquense DSM 11551, Halogeometricum borinquense JCM 10706, Halogeometricum borinquense PR 3, Halogeometricum borinquense str. DSM 11551, Halogeometricum borinquense strain DSM 11551
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