STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ67328.1Predicted metal-binding protein; PFAM: Uncharacterised protein family UPF0058. (92 aa)    
Predicted Functional Partners:
ADQ67329.1
Hypothetical protein.
     
 0.758
ADQ66701.1
PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, putative.
  
     0.700
ADQ67760.1
RecJ-like exonuclease with DnaJ-type Zn-finger domain; PFAM: DHH family; S1 RNA binding domain; OB-fold nucleic acid binding domain.
  
   
 0.693
cofC
Phospholactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.681
ADQ66984.1
RecJ-like exonuclease with DnaJ-type Zn-finger domain; PFAM: S1 RNA binding domain; OB-fold nucleic acid binding domain.
  
     0.673
ADQ67217.1
Predicted transcriptional regulator, contains C-terminal CBS domains; PFAM: Domain of unknown function.
  
     0.673
ADQ67961.1
Predicted transcriptional regulator; PFAM: MarR family.
 
     0.669
ADQ67327.1
Uncharacterized membrane protein; PFAM: Rhomboid family.
       0.655
ADQ65820.1
PFAM: Uncharacterized protein conserved in archaea (DUF2073).
  
   
 0.586
ADQ66061.1
Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain.
  
     0.578
Your Current Organism:
Halogeometricum borinquense
NCBI taxonomy Id: 469382
Other names: H. borinquense DSM 11551, Halogeometricum borinquense ATCC 700274, Halogeometricum borinquense DSM 11551, Halogeometricum borinquense JCM 10706, Halogeometricum borinquense PR 3, Halogeometricum borinquense str. DSM 11551, Halogeometricum borinquense strain DSM 11551
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.