Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADQ66468.1 | ADQ67661.1 | Hbor_08720 | Hbor_20970 | PFAM: Cytochrome oxidase assembly protein. | Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family. | 0.412 |
ADQ66774.1 | ADQ67661.1 | Hbor_11850 | Hbor_20970 | PFAM: Multicopper oxidase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence. | Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family. | 0.419 |
ADQ67661.1 | ADQ66468.1 | Hbor_20970 | Hbor_08720 | Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family. | PFAM: Cytochrome oxidase assembly protein. | 0.412 |
ADQ67661.1 | ADQ66774.1 | Hbor_20970 | Hbor_11850 | Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family. | PFAM: Multicopper oxidase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence. | 0.419 |
ADQ67661.1 | ADQ67662.1 | Hbor_20970 | Hbor_20980 | Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family. | Archaetidylserine synthase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.698 |
ADQ67661.1 | ADQ68227.1 | Hbor_20970 | Hbor_26750 | Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family. | PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing; Tat (twin-arginine translocation) pathway signal sequence. | 0.421 |
ADQ67662.1 | ADQ67661.1 | Hbor_20980 | Hbor_20970 | Archaetidylserine synthase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family. | 0.698 |
ADQ68227.1 | ADQ67661.1 | Hbor_26750 | Hbor_20970 | PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing; Tat (twin-arginine translocation) pathway signal sequence. | Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family. | 0.421 |