STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0047PFAM: flagellar hook-length control protein; KEGG: hypothetical protein. (482 aa)    
Predicted Functional Partners:
Cwoe_0046
PFAM: Lytic transglycosylase catalytic; KEGG: cja:CJA_2884 lytic murein transglycosylase, putative, lmt23D.
 
   
 0.819
Cwoe_0045
TIGRFAM: flagellar export protein FliJ; KEGG: ade:Adeh_1353 hypothetical protein.
       0.798
Cwoe_0048
PFAM: flagellar hook capping protein; KEGG: sat:SYN_02840 flagellar hook capping protein.
       0.774
Cwoe_0049
TIGRFAM: flagellar operon protein; KEGG: gme:Gmet_3104 hypothetical protein.
       0.747
Cwoe_0050
TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: gme:Gmet_0431 flagellar basal body rod protein FlgG.
   
   0.681
Cwoe_0044
PFAM: Helix-turn-helix type 11 domain protein; KEGG: bbt:BBta_6686 hypothetical protein.
       0.665
Cwoe_3420
KEGG: bcj:BCAM1580 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.661
Cwoe_0051
PFAM: flagellar FlbD family protein; KEGG: gme:Gmet_0462 flagellar protein.
 
     0.648
Cwoe_3996
PFAM: transcriptional activator domain; KEGG: reh:H16_B0393 transcriptional regulator, LuxR- family.
 
    0.638
Cwoe_5297
PFAM: O-antigen polymerase; KEGG: mxa:MXAN_1052 O-antigen polymerase family protein.
 
     0.604
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.