STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0151PFAM: Chlorite dismutase; KEGG: dar:Daro_2580 chlorite dismutase. (222 aa)    
Predicted Functional Partners:
Cwoe_2840
PFAM: MaoC domain protein dehydratase; KEGG: acp:A2cp1_2873 hypothetical protein.
  
   
 0.632
Cwoe_4526
SMART: DEAD-like helicase; KEGG: sde:Sde_1925 GGDEF family protein.
  
     0.598
Cwoe_0644
KEGG: bxe:Bxe_C0555 hypothetical protein.
 
     0.596
Cwoe_3309
Hypothetical protein.
 
     0.586
nucS
Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
     0.552
Cwoe_0152
Hypothetical protein.
       0.510
Cwoe_3465
TIGRFAM: DNA binding domain protein, excisionase family; PFAM: TOBE domain protein; regulatory protein MerR; KEGG: dma:DMR_17150 molybdenum-pterin binding protein.
  
     0.504
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.496
Cwoe_0551
PFAM: MMPL domain protein; KEGG: hypothetical protein.
  
     0.478
Cwoe_5826
PFAM: protein of unknown function DUF75; KEGG: sfu:Sfum_3209 hypothetical protein.
  
     0.460
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.