STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0309PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_4458 major facilitator superfamily transporter. (412 aa)    
Predicted Functional Partners:
Cwoe_0310
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bxe:Bxe_B0714 ArsR family transcriptional regulator.
       0.566
Cwoe_4867
Putative phytochrome sensor protein; PFAM: transcriptional regulator domain protein; GAF domain protein; KEGG: reu:Reut_C6170 helix-turn-helix, fis-type.
  
   
 0.504
Cwoe_0710
PFAM: amino acid permease-associated region; KEGG: pen:PSEEN5442 amino acid transporter.
  
     0.493
Cwoe_0420
PFAM: regulatory protein TetR; KEGG: xca:xccb100_3599 putative transcriptional regulator, TetR family.
  
     0.482
Cwoe_4856
PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: spl:Spea_1117 C4-dicarboxylate transporter/malic acid transport protein.
  
     0.473
Cwoe_5376
PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: smt:Smal_2045 arsenical pump membrane protein.
 
   
 0.455
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.