STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0558PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rec:RHECIAT_CH0003965 short chain dehydrogenase. (269 aa)    
Predicted Functional Partners:
Cwoe_5549
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azo:azo0383 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.788
Cwoe_5919
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: dal:Dalk_2816 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.772
Cwoe_3253
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: vap:Vapar_0808 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.769
Cwoe_2667
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psa:PST_1446 short chain dehydrogenase/reductase family oxidoreductase.
 
  
 0.704
Cwoe_0557
KEGG: xop:PXO_04341 hypothetical protein.
  
    0.678
Cwoe_2357
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_A1567 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.641
Cwoe_0562
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: avn:Avin_22070 short-chain dehydrogenase/reductase SDR protein.
 
    
0.619
Cwoe_0564
PFAM: protein of unknown function DUF718; KEGG: vei:Veis_2123 hypothetical protein.
  
  
 0.558
Cwoe_0563
PFAM: amidohydrolase 2; KEGG: bbt:BBta_3275 hypothetical protein.
  
    0.516
Cwoe_0565
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xcv:XCV2561 putative glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein.
  
   0.516
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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