STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0623PFAM: cyclase family protein; KEGG: dal:Dalk_2911 cyclase family protein. (220 aa)    
Predicted Functional Partners:
Cwoe_0622
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: oan:Oant_3101 xylose isomerase domain- containing protein.
       0.779
Cwoe_0621
TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: efe:EFER_0428 putative galactose-6-phosphate isomerase.
       0.774
Cwoe_0618
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: maq:Maqu_0164 response regulator receiver protein.
       0.773
Cwoe_0619
PFAM: Dak phosphatase; KEGG: aha:AHA_4007 dihydroxyacetone kinase ADP- binding subunit.
       0.773
Cwoe_0620
PFAM: Dak kinase; KEGG: mlo:mll7280 dihydroxyacetone kinase.
       0.773
Cwoe_2361
PFAM: cyclase family protein; KEGG: dal:Dalk_1541 cyclase family protein.
  
     0.773
Cwoe_4925
PFAM: cyclase family protein; KEGG: vap:Vapar_0647 cyclase family protein.
  
     0.769
Cwoe_2733
PFAM: cyclase family protein; KEGG: cps:CPS_3501 putative cyclase.
  
     0.755
Cwoe_0625
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B0533 short chain dehydrogenase.
  
    0.554
Cwoe_0626
PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; GntR domain protein; Glu/Leu/Phe/Val dehydrogenase; KEGG: bbt:BBta_2839 glutamate dehydrogenase (NAD(P)+) oxidoreductase protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.552
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.