STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0718PFAM: Auxin Efflux Carrier; KEGG: ilo:IL2112 malate permease. (318 aa)    
Predicted Functional Partners:
Cwoe_1876
Hypothetical protein; KEGG: scl:sce3217 serine/threonine-protein kinase.
  
     0.752
Cwoe_2686
PFAM: import inner membrane translocase subunit Tim44; KEGG: gme:Gmet_1927 import inner membrane translocase, subunit Tim44.
  
     0.750
Cwoe_2894
SMART: AAA ATPase; KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein.
  
     0.715
Cwoe_1439
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: hypothetical protein LOC100017301.
  
     0.708
Cwoe_1596
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: pla:Plav_1547 MerR family transcriptional regulator.
  
     0.653
Cwoe_0486
Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)); PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: hypothetical protein; K00027 malate dehydrogenase (oxaloacetate-decarboxylating).
  
  
 0.652
Cwoe_2866
Malate dehydrogenase (oxaloacetate- decarboxylating); PFAM: malic protein NAD-binding; amino acid-binding ACT domain protein; malic protein domain protein; KEGG: sat:SYN_00517 NAD-dependent malic enzyme.
  
  
 0.652
Cwoe_3475
PFAM: DSBA oxidoreductase; KEGG: gbm:Gbem_2523 DsbA oxidoreductase.
  
     0.628
Cwoe_1446
KEGG: hypothetical protein.
 
     0.621
Cwoe_1449
KEGG: hypothetical protein.
 
     0.618
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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