STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0806PFAM: GYD family protein; KEGG: mes:Meso_1466 hypothetical protein. (93 aa)    
Predicted Functional Partners:
purD
KEGG: afw:Anae109_1400 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP- grasp (A) domain; Phosphoribosylglycinamide synthetase, N- domain; Phosphoribosylglycinamide synthetase, C-domain; protein of unknown function DUF201; Belongs to the GARS family.
       0.751
purE
Phosphoribosylaminoimidazole carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.740
Cwoe_0085
PFAM: protein of unknown function DUF354; KEGG: lch:Lcho_1392 hypothetical protein.
  
     0.571
Cwoe_0805
Hypothetical protein.
       0.550
Cwoe_0803
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sml:Smlt2614 putative glyoxylase/bleomycin resistance protein.
       0.534
Cwoe_0804
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: vap:Vapar_5737 transcriptional regulator, AraC family.
       0.534
Cwoe_2871
PFAM: monooxygenase FAD-binding; KEGG: afr:AFE_2544 geranylgeranyl reductase family protein.
  
     0.489
Cwoe_0079
PFAM: CHAP domain containing protein; KEGG: bam:Bamb_5483 hypothetical protein.
  
     0.479
Cwoe_3475
PFAM: DSBA oxidoreductase; KEGG: gbm:Gbem_2523 DsbA oxidoreductase.
  
     0.449
Cwoe_0791
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: noc:Noc_2982 CDP-alcohol phosphatidyltransferase.
  
     0.448
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.