STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0812PFAM: FAD dependent oxidoreductase; KEGG: bpe:BP3109 hypothetical protein. (473 aa)    
Predicted Functional Partners:
Cwoe_0813
PFAM: extracellular solute-binding protein family 1; KEGG: bja:blr3547 ABC transporter substrate-binding protein.
 
   
 0.825
Cwoe_0814
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atu:Atu5127 ABC transporter, membrane spanning protein (mannopine).
  
    0.791
Cwoe_0816
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: reh:H16_B1829 ABC-type transporter, ATPase component: POPT family; Belongs to the ABC transporter superfamily.
  
    0.791
Cwoe_0815
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tmz:Tmz1t_0427 binding-protein-dependent transport systems inner membrane component.
       0.785
Cwoe_0811
PFAM: creatinase; peptidase M24; KEGG: atc:AGR_pAT_704 Xaa-Pro dipeptidase.
  
    0.604
Cwoe_0926
PFAM: FAD dependent oxidoreductase; KEGG: vei:Veis_0207 FAD dependent oxidoreductase.
  
     0.549
Cwoe_0818
TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; KEGG: sfu:Sfum_0660 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.544
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.541
Cwoe_0810
KEGG: smd:Smed_0346 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein.
  
  
 0.526
Cwoe_2112
PFAM: FAD dependent oxidoreductase; KEGG: rle:RL0097 pyruvate dehydrogenase phosphatase regulatory subunit.
  
     0.525
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.