STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0895PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_31240 putative NrbE-like protein. (457 aa)    
Predicted Functional Partners:
Cwoe_0894
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: dat:HRM2_16970 HTH-type transcriptional regulator (ArsR family protein).
       0.577
Cwoe_2102
Acetyltransferase; KEGG: scl:sce0310 acetyltransferase.
   
  
 0.552
Cwoe_3185
Acetyltransferase; KEGG: scl:sce0310 acetyltransferase.
   
  
 0.552
Cwoe_0317
PFAM: protein of unknown function DUF1089; KEGG: bmj:BMULJ_03939 hypothetical protein.
  
     0.454
Cwoe_4900
TIGRFAM: YtoQ family protein; KEGG: abo:ABO_0040 hypothetical protein.
  
     0.441
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.