STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0927PFAM: extracellular solute-binding protein family 5; KEGG: ecx:EcHS_A1572 putative ABC transporter periplasmic-binding protein YddS precursor. (544 aa)    
Predicted Functional Partners:
Cwoe_0929
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcs:BCAN_B1103 peptide ABC transporter permease.
 
   0.940
Cwoe_0928
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4120 binding-protein-dependent transport systems inner membrane component.
 
   0.938
Cwoe_0931
KEGG: mxa:MXAN_4664 oligopeptide/dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    0.784
Cwoe_0930
KEGG: bch:Bcen2424_5539 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
    0.755
Cwoe_0455
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr0987 ABC transporter permease.
 
   0.703
Cwoe_2325
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr0987 ABC transporter permease.
 
   0.696
Cwoe_5042
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll2866 ABC transporter permease protein.
 
   0.671
Cwoe_2238
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlg:Rleg_0424 binding-protein-dependent transport systems inner membrane component.
 
   0.663
Cwoe_5709
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA1471 putative dipeptide ABC transporter (permease).
 
   0.663
Cwoe_2053
KEGG: mes:Meso_0076 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; binding-protein- dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.652
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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