STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0946Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_PB0000107 probable transcriptional regulator protein, GntR family. (239 aa)    
Predicted Functional Partners:
Cwoe_2765
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bpa:BPP0695 GntR family transcriptional regulator.
  
     0.775
Cwoe_0947
Hypothetical protein.
       0.757
Cwoe_5046
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: dvm:DvMF_1205 GntR domain protein.
  
  
 0.621
Cwoe_2418
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vap:Vapar_5148 GntR domain protein.
  
  
 0.586
Cwoe_0945
PFAM: flavin reductase domain protein FMN-binding; KEGG: abb:ABBFA_001751 nitrilotriacetate monooxygenase component B.
       0.561
Cwoe_4412
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: lhk:LHK_02842 PdhR.
  
  
 0.511
Cwoe_2306
PFAM: GntR domain protein; regulatory protein GntR HTH; protein of unknown function UPF0074; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_0962 GntR domain-containing protein.
  
  
 0.486
Cwoe_3965
PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: gem:GM21_1321 regulatory protein GntR HTH.
  
  
 0.405
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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