STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_0999PFAM: peptidase M42 family protein; KEGG: pca:Pcar_1216 putative lyase/synthase. (351 aa)    
Predicted Functional Partners:
Cwoe_1000
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mxa:MXAN_3057 HAD superfamily hydrolase.
       0.785
Cwoe_0998
PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: sml:Smlt4512 putative exported protease.
       0.757
Cwoe_0997
TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: eba:ebA6773 aconitate hydratase.
  
    0.599
Cwoe_3060
PFAM: peptidase M24; creatinase; KEGG: gsu:GSU2021 xaa-pro dipeptidase; Belongs to the peptidase M24B family.
 
  
 0.467
Cwoe_2742
PFAM: peptidase M24; KEGG: gur:Gura_1824 peptidase M24.
 
  
 0.464
Cwoe_0936
PFAM: peptidase M24; KEGG: Xaa-Pro dipeptidase; Belongs to the peptidase M24B family.
 
  
 0.443
Cwoe_3845
PFAM: peptidase M24; creatinase; KEGG: mes:Meso_2395 peptidase M24.
 
  
 0.415
Cwoe_3087
PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: glo:Glov_3034 peptidase T-like protein.
 
  
 0.414
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.