STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_1020PFAM: peptidase M55 D-aminopeptidase; KEGG: reu:Reut_A1922 D-aminopeptidase DppA. (279 aa)    
Predicted Functional Partners:
Cwoe_1022
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rec:RHECIAT_PC0000419 putative racemase protein.
  
    0.797
Cwoe_1021
PFAM: Pyridoxal phosphate-dependent transferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rle:pRL110458 hypothetical protein.
       0.773
Cwoe_2559
PFAM: peptidase S58 DmpA; KEGG: ank:AnaeK_1411 peptidase S58 DmpA.
   
 0.714
Cwoe_5412
Hypothetical protein.
  
     0.553
Cwoe_1023
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: reu:Reut_B5462 esterase/lipase/thioesterase.
       0.519
Cwoe_1853
PFAM: peptidase S45 penicillin amidase; KEGG: spe:Spro_3142 penicillin amidase.
  
     0.508
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.