STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_1099KEGG: bam:Bamb_3325 hypothetical protein. (368 aa)    
Predicted Functional Partners:
Cwoe_1100
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.690
Cwoe_4632
PFAM: Cupin 2 conserved barrel domain protein; KEGG: scl:sce0173 hypothetical protein.
 
     0.670
Cwoe_4656
PFAM: FAD dependent oxidoreductase; KEGG: mxa:MXAN_0202 amine oxidase, flavin- containing.
  
     0.640
Cwoe_5161
PFAM: NmrA family protein; KEGG: rlt:Rleg2_5084 NmrA family protein.
 
     0.640
Cwoe_2996
KEGG: ade:Adeh_3125 alpha/beta hydrolase fold-1.
 
     0.617
Cwoe_2443
Hydrolase; KEGG: mlo:mlr2176 hydrolase.
 
     0.616
Cwoe_1097
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: dvu:DVU3310 DEAD-box ATP dependent DNA helicase; Belongs to the DEAD box helicase family.
  
    0.583
Cwoe_1098
PFAM: NUDIX hydrolase; KEGG: bra:BRADO6916 putative NUDIX family protein.
       0.561
Cwoe_5105
KEGG: bmt:BSUIS_B0993 hypothetical protein.
 
     0.553
Cwoe_0880
Hypothetical protein.
 
     0.550
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.