STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_1102PFAM: Protein of unknown function DUF1800; KEGG: cvi:CV_3165 hypothetical protein. (458 aa)    
Predicted Functional Partners:
Cwoe_1103
PFAM: protein of unknown function DUF1501; KEGG: cvi:CV_3166 hypothetical protein.
 
     0.950
Cwoe_0167
PFAM: protein of unknown function DUF1501; KEGG: mxa:MXAN_6390 Tat pathway signal sequence domain-containing protein.
 
     0.788
Cwoe_1101
Hypothetical protein.
       0.778
Cwoe_1100
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.529
Cwoe_1099
KEGG: bam:Bamb_3325 hypothetical protein.
       0.478
Cwoe_4663
PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: GSVIVT00014531001; hypothetical protein LOC100255748.
  
     0.445
Cwoe_0479
PFAM: protein of unknown function UPF0005; KEGG: cff:CFF8240_1784 hypothetical protein; Belongs to the BI1 family.
  
     0.413
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.