STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_1128PFAM: Protein of unknown function DUF2266, transmembrane; KEGG: sme:SMc01670 hypothetical protein. (186 aa)    
Predicted Functional Partners:
Cwoe_1127
Hypothetical protein.
       0.773
Cwoe_0902
PFAM: NmrA family protein; dTDP-4-dehydrorhamnose reductase; KEGG: mlo:mlr3941 hypothetical protein.
 
     0.733
Cwoe_5735
PFAM: NmrA family protein; dTDP-4-dehydrorhamnose reductase; KEGG: mlo:mlr3941 hypothetical protein.
 
     0.715
Cwoe_4894
PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; KEGG: scl:sce8968 nucleotide-diphosphate-sugar epimerase.
 
     0.669
Cwoe_1515
PFAM: NmrA family protein; KEGG: afw:Anae109_3754 NmrA family protein.
 
     0.648
Cwoe_1126
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: vap:Vapar_3549 transcriptional regulator, LuxR family.
 
     0.645
Cwoe_0903
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: dze:Dd1591_1711 transcriptional regulator, AraC family.
 
     0.635
Cwoe_4020
KEGG: scl:sce0707 hypothetical protein.
 
     0.615
Cwoe_4018
PFAM: NmrA family protein; KEGG: scl:sce0707 hypothetical protein.
 
     0.599
Cwoe_1125
PFAM: beta-lactamase domain protein; KEGG: scl:sce5265 Beta-lactamase.
       0.576
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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