STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_1192KEGG: rpa:RPA3076 putative diguanylate cyclase (GGDEF); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein. (495 aa)    
Predicted Functional Partners:
Cwoe_5253
Diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: psa:PST_3107 EAL domain-containing protein.
 
  
 0.847
Cwoe_3143
Diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: ajs:Ajs_3107 diguanylate cyclase/phosphodiesterase.
 
  
 0.846
Cwoe_4732
Diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: bvi:Bcep1808_3059 diguanylate cyclase/phosphodiesterase.
 
  
 0.841
Cwoe_5330
Diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ara:Arad_8490 sensory box/GGDEF family protein.
 
  
 0.807
Cwoe_2575
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dia:Dtpsy_0366 metal dependent phosphohydrolase.
 
 0.779
Cwoe_3786
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: aeh:Mlg_2429 response regulator receiver modulated metal dependent phosphohydrolase.
 
 0.779
Cwoe_4475
KEGG: ank:AnaeK_1178 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
 
 0.779
Cwoe_5850
Metal dependent phosphohydrolase; KEGG: sfu:Sfum_3292 response regulator receiver modulated metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region.
 
 0.779
Cwoe_1193
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_4368 LysR family transcriptional regulator.
  
    0.775
Cwoe_3133
Diguanylate cyclase; KEGG: xcv:XCV1610 putative sensor protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein.
  
     0.775
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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