STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_1524PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: reh:H16_B0821 transcriptional regulator, LuxR- family. (907 aa)    
Predicted Functional Partners:
Cwoe_1526
PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mxa:MXAN_6505 sulfate permease.
 
     0.831
Cwoe_1527
PFAM: membrane protein of uknown function UCP014873; KEGG: dma:DMR_11930 hypothetical protein.
 
     0.818
Cwoe_1525
KEGG: cti:RALTA_A1525 putative nonspecific acid phosphatase.
       0.773
Cwoe_1523
ATP-dependent transcriptional regulator, MalT- like, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: xcv:XCV3536 LuxR family transcriptional regulator.
 
    
0.649
Cwoe_1528
KEGG: pnu:Pnuc_0543 protein tyrosine/serine phosphatase.
       0.620
Cwoe_0756
Hypothetical protein.
 
     0.525
Cwoe_1529
Hypothetical protein.
       0.518
Cwoe_0754
KEGG: ade:Adeh_4091 hypothetical protein.
 
     0.447
Cwoe_3391
Hypothetical protein.
 
     0.421
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.