STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_1970KEGG: scl:sce5408 hypothetical protein. (144 aa)    
Predicted Functional Partners:
Cwoe_2470
PFAM: ABC-2 type transporter; KEGG: bcj:BCAS0203 ABC transporter protein.
 
    0.449
Cwoe_4607
PFAM: protein of unknown function DUF214; KEGG: eba:ebA6805 hypothetical protein.
 
    0.413
Cwoe_2394
PFAM: regulatory protein TetR; KEGG: mes:Meso_0701 TetR family transcriptional regulator.
  
    0.410
Cwoe_4806
PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_2042 hypothetical protein.
 
    0.403
Cwoe_0867
PFAM: major facilitator superfamily MFS_1; KEGG: SH3, pleckstrin-like and PDZ/DHR/GLGF domain- containing protein.
  
     0.402
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.