STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2003KEGG: Os03g0646900; hypothetical protein. (184 aa)    
Predicted Functional Partners:
Cwoe_2004
PFAM: flavin reductase domain protein FMN-binding; KEGG: bgl:bglu_2g17480 4-hydroxyphenylacetate 3- monooxygenase, reductase component.
       0.538
Cwoe_2002
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA0856 ABC transporter, periplasmic binding protein.
       0.458
Cwoe_2000
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C1160 polar amino acid ABC transporter ATPase.
       0.435
Cwoe_2001
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C1161 polar amino acid ABC transporter inner membrane protein.
       0.435
Cwoe_2005
Hypothetical protein; KEGG: GH14190 gene product from transcript GH14190- RA.
       0.405
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.