STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_2149Indolepyruvate ferredoxin oxidoreductase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: vap:Vapar_1490 indolepyruvate ferredoxin oxidoreductase. (720 aa)    
Predicted Functional Partners:
Cwoe_2148
KEGG: pol:Bpro_4735 putative indolepyruvate oxidoreductase subunit B.
 
 
 0.968
Cwoe_2147
PFAM: cyclase family protein; KEGG: oan:Oant_4027 cyclase family protein.
 
     0.940
Cwoe_4925
PFAM: cyclase family protein; KEGG: vap:Vapar_0647 cyclase family protein.
 
     0.747
Cwoe_2817
PFAM: monooxygenase FAD-binding; KEGG: scl:sce8661 oxidoreductase.
 
     0.722
Cwoe_4712
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: afw:Anae109_1891 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.710
Cwoe_2161
PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase FAD-binding; KEGG: scl:sce8661 oxidoreductase.
 
   
 0.686
Cwoe_3874
KEGG: bcj:BCAM2134 hypothetical protein.
 
   
 0.675
Cwoe_2146
GAF modulated transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; GAF domain protein; SMART: regulatory protein LuxR; KEGG: pap:PSPA7_1186 transcriptional regulator.
       0.610
Cwoe_2159
PFAM: Endoribonuclease L-PSP; KEGG: scl:sce2000 translation initiation inhibitor.
 
     0.591
Cwoe_2150
Transcriptional regulator, PaaX family; PFAM: PaaX domain protein domain; PaaX domain protein; KEGG: bpt:Bpet1923 phenylacetic acid degradation operon negative regulatory protein.
 
     0.584
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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